Index

_

__call__() (AffineTransformResponse method) (AnalyticalMultiObjective method) (AnalyticalObjective method) (ChainResponse method) (ClipResponse method) (GenericObjective method) (MaximumResponse method) (MinimumResponse method) (NegateResponse method) (Objective method) (PointwiseErrors method) (ResamplingLoss method) (ResponseDesignObjective method) (ResponseFittingObjective method) (ResponseObjective method) (ResponseTransformer method) (SquareResponse method) (SyntheticObjective method)

A

add() (DualParameterSet method) (ParameterSet method), [1] add_output() (DualParameterSet method), [1] AffineTransformResponse (class in piglot.utils.response_transformer)

AnalyticalMultiObjective (class in piglot.objectives.analytical), [1] AnalyticalObjective (class in piglot.objectives.analytical), [1] AnalyticalSingleObjective (class in piglot.objectives.analytical), [1] AOA (class in piglot.optimisers.aoa), [1] AVAILABLE_VERBOSITIES (VerbosityManager attribute)

B

BayesDataset (class in piglot.optimisers.botorch.dataset), [1] BayesianBoTorch (class in piglot.optimisers.botorch.bayes), [1]

begin_time (CaseResult attribute) boundary_check() (in module piglot.optimiser), [1]

C

Case (class in piglot.solver.multi_case_solver), [1] CaseResult (class in piglot.solver.solver), [1] ChainResponse (class in piglot.utils.response_transformer) change_cwd() (in module piglot.utils.assorted), [1] check() (OutFile method), [1] (OutputField method), [1] (Reaction method), [1] (ScriptOutputField method), [1] check_criteria() (StoppingCriteria method), [1] check_state_key() (UniqueKeyLoader method) clip() (DualParameterSet method) (Parameter method), [1] (ParameterSet method), [1] ClipResponse (class in piglot.utils.response_transformer) clone_output() (DualParameterSet method), [1]

Composition (class in piglot.objective), [1] composition() (Composition method), [1] (FullComposition method) (ResponseComposition method) (ScalarisationComposition method), [1] composition_torch() (Composition method), [1] (FullComposition method) (ResponseComposition method) (ScalarisationComposition method), [1], [2] compute_objective_function() (GlobalBestPSOMod method), [1] construct_mapping() (UniqueKeyLoader method) covariances (ObjectiveResult attribute) cumulative_regret() (in module piglot.bin.piglot_plot), [1] CurveCase (class in piglot.solver.curve.solver), [1] CurveSolver (class in piglot.solver.curve.solver), [1]

D

data (OutputResult attribute) default_acquisition() (in module piglot.optimisers.botorch.bayes), [1] DEFAULT_VERBOSITY (VerbosityManager attribute) DefaultInputDataGenerator (class in piglot.solver.input_file_solver), [1] DesignSingleObjective (class in piglot.objectives.design), [1]

diagonal() (Rectangle method), [1] DIRECT (class in piglot.optimisers.direct), [1] DualParameterSet (class in piglot.parameter), [1] DynamicPlotter (class in piglot.objective), [1] DynamicResponsePlotter (class in piglot.objectives.response_objective)

E

errors_interps() (in module piglot.utils.responses), [1] evaluate() (AnalyticalSingleObjective method), [1] (DesignSingleObjective method) (FittingSingleObjective method) (ResponseSingleObjective method)

evaluate_from_latent_space() (DesignSingleObjective method) (FittingSingleObjective method) (ResponseSingleObjective method) extract_parameters() (in module piglot.utils.solver_utils), [1]

F

filter_close_points() (in module piglot.utils.assorted), [1] find_keyword() (in module piglot.utils.solver_utils), [1] fit() (PCA method), [1] (Standardiser method), [1]

fit_mll_pytorch_loop() (in module piglot.optimisers.botorch.bayes), [1] FittingSingleObjective (class in piglot.objectives.fitting), [1] flush() (VerbosityManager method), [1] FullComposition (class in piglot.objectives.response_objective)

G

GA (class in piglot.optimisers.ga), [1] generate() (DefaultInputDataGenerator method), [1] (InputDataGenerator method), [1] GenericObjective (class in piglot.objective), [1] geneticalgorithmMod (class in piglot.optimisers.ga), [1] get() (OutFile method), [1] (OutputField method), [1] (Reaction method), [1] (ScriptOutputField method) get_case_class() (CurveSolver class method), [1] (InputFileSolver class method), [1] (LinksSolver class method), [1] (MultiCaseSolver class method), [1] get_case_name() (in module piglot.utils.solver_utils), [1] get_case_params() (CurveSolver method) (InputFileSolver method) (LinksSolver method) (MultiCaseSolver method), [1] (ScriptSolver method) (SingleCaseSolver method), [1] (Solver method), [1] get_case_result() (ScriptSolver method) (SingleCaseSolver method), [1] get_case_results() (CurveSolver method) (InputFileSolver method) (LinksSolver method) (MultiCaseSolver method), [1] get_current_response() (CurveSolver method) (InputFileSolver method) (LinksSolver method) (MultiCaseSolver method) (ScriptSolver method) (SingleCaseSolver method) (Solver method), [1] get_data() (OutputResult method), [1] (Reference method), [1] get_default_torch_device() (in module piglot.optimisers.botorch.bayes), [1] get_dependencies() (InputFileCase class method), [1] (LinksCase class method), [1]

get_expression() (CurveCase method), [1] get_fields() (Case method), [1] (CurveCase method), [1] (InputFileCase method), [1] (LinksCase method) get_history() (AnalyticalMultiObjective method) (AnalyticalObjective method) (GenericObjective method), [1] (Objective method), [1] (ResponseDesignObjective method) (ResponseFittingObjective method) (ResponseObjective method) (SyntheticObjective method) get_latent_space() (FullComposition method) (ResponseComposition method) (ScalarisationComposition method) get_model() (in module piglot.utils.surrogate), [1] get_output_fields() (CurveSolver method) (InputFileSolver method) (LinksSolver method) (MultiCaseSolver method), [1] (ScriptSolver method) (ScriptSolverCallable static method), [1] (SingleCaseSolver method), [1] (Solver method), [1] get_output_response() (CurveSolver method) (InputFileSolver method) (LinksSolver method) (MultiCaseSolver method), [1] (ScriptSolver method) (SingleCaseSolver method), [1] (Solver method), [1] get_supported_fields() (InputFileCase class method), [1] (LinksCase class method), [1] get_test_functions() (SyntheticObjective static method), [1] get_time() (OutputResult method), [1] (Reference method), [1] GlobalBestPSOMod (class in piglot.optimisers.pso), [1] GlobalOptimizerMod (class in piglot.optimisers.lipo_opt), [1]

H

has_filtering() (Reference method), [1] has_keyword() (in module piglot.utils.solver_utils), [1]

has_parameter() (in module piglot.utils.solver_utils), [1] hash() (DualParameterSet static method) (ParameterSet static method), [1]

I

IndividualObjective (class in piglot.objective), [1] InputData (class in piglot.solver.input_file_solver), [1] InputDataGenerator (class in piglot.solver.input_file_solver), [1]

InputFileCase (class in piglot.solver.input_file_solver), [1] InputFileSolver (class in piglot.solver.input_file_solver), [1] interpolate_response() (in module piglot.utils.responses), [1] InvalidOptimiserException, [1]

L

latent_space() (DesignSingleObjective method) (FittingSingleObjective method) (ResponseSingleObjective method) LinksCase (class in piglot.solver.links.solver), [1]

LinksSolver (class in piglot.solver.links.solver), [1] LIPO (class in piglot.optimisers.lipo_opt), [1] load() (BayesDataset class method), [1] load_module_from_file() (in module piglot.utils.solver_utils), [1]

M

main() (in module piglot.bin.piglot), [1] (in module piglot.bin.piglot_plot), [1] make_surrogate() (in module piglot.bin.piglot_plot), [1] MaximumResponse (class in piglot.utils.response_transformer) MaxScalarisation (class in piglot.utils.scalarisations) MeanScalarisation (class in piglot.utils.scalarisations) min() (BayesDataset method), [1] MinimumResponse (class in piglot.utils.response_transformer) MinScalarisation (class in piglot.utils.scalarisations) missing_method() (in module piglot.optimiser), [1] module piglot, [1] piglot.bin, [1] piglot.bin.piglot, [1] piglot.bin.piglot_plot, [1] piglot.objective, [1] piglot.objectives, [1] piglot.objectives.analytical, [1] piglot.objectives.design, [1] piglot.objectives.fitting, [1] piglot.objectives.response_objective piglot.objectives.synthetic, [1] piglot.optimiser, [1] piglot.optimisers, [1] piglot.optimisers.aoa, [1] piglot.optimisers.botorch, [1] piglot.optimisers.botorch.bayes, [1] piglot.optimisers.botorch.dataset, [1] piglot.optimisers.direct, [1] piglot.optimisers.ga, [1] piglot.optimisers.lipo_opt, [1] piglot.optimisers.pso, [1] piglot.optimisers.query piglot.optimisers.random_search, [1] piglot.optimisers.spsa, [1] piglot.optimisers.spsa_adam, [1] piglot.parameter, [1] piglot.solver, [1] piglot.solver.curve, [1] piglot.solver.curve.solver, [1] piglot.solver.input_file_solver, [1] piglot.solver.links, [1] piglot.solver.links.fields, [1] piglot.solver.links.solver, [1] piglot.solver.multi_case_solver, [1] piglot.solver.script_solver, [1] piglot.solver.solver, [1] piglot.utils, [1] piglot.utils.assorted, [1] piglot.utils.reductions piglot.utils.response_transformer piglot.utils.responses, [1] piglot.utils.scalarisations piglot.utils.solver_utils, [1] piglot.utils.surrogate, [1] piglot.utils.yaml_parser, [1]

MonteCarloScalarisation (class in piglot.utils.scalarisations) MultiCaseSolver (class in piglot.solver.multi_case_solver), [1]

N

name() (Case method), [1] (CurveCase method), [1] (InputFileCase method), [1] (LinksCase method)

NegateReduction (class in piglot.utils.reductions) NegateResponse (class in piglot.utils.response_transformer) numel_latent_space() (BayesDataset method), [1]

O

obj_values (ObjectiveResult attribute) obj_variances (ObjectiveResult attribute) Objective (class in piglot.objective), [1] ObjectiveResult (class in piglot.objective), [1] optimise() (AOA method) (BayesianBoTorch method) (DIRECT method) (GA method) (LIPO method) (Optimiser method), [1] (PSO method) (PureRandomSearch method) (QueryOptimiser method) (ScalarOptimiser method) (SPSA method) (SPSA_Adam method)

Optimiser (class in piglot.optimiser), [1] optimize() (GlobalBestPSOMod method), [1] optmise_posterior_mean() (in module piglot.utils.surrogate), [1] OutFile (class in piglot.solver.links.fields), [1] OutputField (class in piglot.solver.input_file_solver), [1] OutputParameter (class in piglot.parameter), [1] OutputResult (class in piglot.solver.solver), [1]

P

param_hash (CaseResult attribute) Parameter (class in piglot.parameter), [1] ParameterSet (class in piglot.parameter), [1] params (ObjectiveResult attribute) parse_args() (in module piglot.bin.piglot), [1] parse_config_file() (in module piglot.utils.yaml_parser), [1] PCA (class in piglot.optimisers.botorch.dataset), [1] pick_from_best() (in module piglot.bin.piglot_plot), [1] piglot module, [1] piglot.bin module, [1] piglot.bin.piglot module, [1] piglot.bin.piglot_plot module, [1] piglot.objective module, [1] piglot.objectives module, [1] piglot.objectives.analytical module, [1] piglot.objectives.design module, [1] piglot.objectives.fitting module, [1] piglot.objectives.response_objective module piglot.objectives.synthetic module, [1] piglot.optimiser module, [1] piglot.optimisers module, [1] piglot.optimisers.aoa module, [1] piglot.optimisers.botorch module, [1] piglot.optimisers.botorch.bayes module, [1] piglot.optimisers.botorch.dataset module, [1] piglot.optimisers.direct module, [1] piglot.optimisers.ga module, [1] piglot.optimisers.lipo_opt module, [1] piglot.optimisers.pso module, [1] piglot.optimisers.query module piglot.optimisers.random_search module, [1] piglot.optimisers.spsa module, [1] piglot.optimisers.spsa_adam module, [1] piglot.parameter module, [1] piglot.solver module, [1] piglot.solver.curve module, [1] piglot.solver.curve.solver module, [1] piglot.solver.input_file_solver module, [1] piglot.solver.links module, [1] piglot.solver.links.fields module, [1] piglot.solver.links.solver module, [1] piglot.solver.multi_case_solver module, [1] piglot.solver.script_solver module, [1] piglot.solver.solver module, [1]

piglot.utils module, [1] piglot.utils.assorted module, [1] piglot.utils.reductions module piglot.utils.response_transformer module piglot.utils.responses module, [1] piglot.utils.scalarisations module piglot.utils.solver_utils module, [1] piglot.utils.surrogate module, [1] piglot.utils.yaml_parser module, [1] plot() (DesignSingleObjective method), [1] (FittingSingleObjective method), [1] (ResponseSingleObjective method) plot_1d() (AnalyticalSingleObjective method), [1] plot_2d() (AnalyticalSingleObjective method), [1] plot_animation() (in module piglot.bin.piglot_plot), [1] plot_best() (AnalyticalMultiObjective method) (AnalyticalObjective method) (GenericObjective method), [1] (in module piglot.bin.piglot_plot), [1] (Objective method), [1] (ResponseDesignObjective method) (ResponseFittingObjective method) (ResponseObjective method) (SyntheticObjective method) plot_case() (AnalyticalMultiObjective method), [1] (AnalyticalObjective method), [1] (GenericObjective method) (in module piglot.bin.piglot_plot), [1] (Objective method), [1] (ResponseDesignObjective method) (ResponseFittingObjective method) (ResponseObjective method) (SyntheticObjective method) plot_current() (AnalyticalMultiObjective method) (AnalyticalObjective method) (GenericObjective method) (in module piglot.bin.piglot_plot), [1] (Objective method), [1] (ResponseDesignObjective method) (ResponseFittingObjective method) (ResponseObjective method) (SyntheticObjective method) plot_gp() (in module piglot.bin.piglot_plot), [1] plot_history() (in module piglot.bin.piglot_plot), [1] plot_parameters() (in module piglot.bin.piglot_plot), [1] plot_pareto() (in module piglot.bin.piglot_plot), [1] plot_regret() (in module piglot.bin.piglot_plot), [1] PointwiseErrors (class in piglot.utils.response_transformer) postproc_responses() (ResponseDesignObjective method) (ResponseFittingObjective method) (ResponseObjective method) prepare() (AnalyticalMultiObjective method) (AnalyticalObjective method) (CurveSolver method) (GenericObjective method), [1] (InputFileSolver method) (LinksSolver method) (MultiCaseSolver method), [1] (Objective method), [1] (Reference method), [1] (ResponseDesignObjective method) (ResponseFittingObjective method), [1] (ResponseObjective method) (ScriptSolver method) (SingleCaseSolver method), [1] (Solver method), [1] (SyntheticObjective method) (VerbosityManager method), [1] pretty_time() (in module piglot.utils.assorted), [1] PSO (class in piglot.optimisers.pso), [1] PureRandomSearch (class in piglot.optimisers.random_search), [1] push() (BayesDataset method), [1]

Q

QueryOptimiser (class in piglot.optimisers.query)

R

Reaction (class in piglot.solver.links.fields), [1] read() (AnalyticalMultiObjective class method), [1] (AnalyticalObjective class method), [1] (AnalyticalSingleObjective class method), [1] (Case class method), [1] (CaseResult static method), [1] (CurveCase class method), [1] (CurveSolver class method) (DesignSingleObjective class method), [1] (FittingSingleObjective class method), [1] (GenericObjective class method) (InputFileCase class method), [1] (InputFileSolver class method) (LinksCase class method) (LinksSolver class method) (MultiCaseSolver class method), [1] (Objective class method), [1] (OutFile class method), [1] (OutputField class method), [1] (Reaction class method), [1] (Reference static method), [1] (ResponseDesignObjective class method), [1] (ResponseFittingObjective class method), [1] (ResponseObjective class method) (ResponseSingleObjective class method) (ScriptOutputField static method), [1] (ScriptSolver class method), [1] (SingleCaseSolver class method) (Solver class method), [1] (StoppingCriteria static method), [1] (SyntheticObjective static method), [1] read_custom_module() (in module piglot.utils.assorted), [1]

read_objective() (in module piglot.objectives), [1] read_optimiser() (in module piglot.optimisers), [1] read_parameters() (in module piglot.parameter), [1] read_reduction() (in module piglot.utils.reductions) read_response_transformer() (in module piglot.utils.response_transformer) read_scalarisation() (in module piglot.utils.scalarisations) read_solver() (in module piglot.solver), [1] Rectangle (class in piglot.optimisers.direct), [1] reduce() (NegateReduction method) (Reduction method) (SimpleReduction method) reduce_response() (in module piglot.utils.responses), [1] reduce_torch() (NegateReduction method) (Reduction method) (SimpleReduction method) Reduction (class in piglot.utils.reductions) Reference (class in piglot.objectives.fitting), [1] ResamplingLoss (class in piglot.utils.responses), [1] ResponseComposition (class in piglot.objectives.response_objective) ResponseDesignObjective (class in piglot.objectives.design), [1] ResponseFittingObjective (class in piglot.objectives.fitting), [1] ResponseObjective (class in piglot.objectives.response_objective) responses (CaseResult attribute) ResponseSingleObjective (class in piglot.objectives.response_objective) ResponseTransformer (class in piglot.utils.response_transformer) reverse_pretty_time() (in module piglot.utils.assorted), [1] run() (Case method), [1] (CurveCase method), [1] (geneticalgorithmMod method) (GlobalOptimizerMod method), [1] (InputFileCase method), [1] (LinksCase method) run_time (CaseResult attribute)

S

save() (BayesDataset method), [1] scalar_value (ObjectiveResult attribute) scalar_variance (ObjectiveResult attribute) Scalarisation (class in piglot.objective), [1] ScalarisationComposition (class in piglot.objectives.analytical), [1] (class in piglot.objectives.response_objective) scalarise() (MaxScalarisation method) (MeanScalarisation method) (MinScalarisation method) (MonteCarloScalarisation method) (Scalarisation method), [1] (SumScalarisation method) scalarise_torch() (MaxScalarisation method) (MeanScalarisation method) (MinScalarisation method) (MonteCarloScalarisation method) (Scalarisation method), [1] (SumScalarisation method) ScalarOptimiser (class in piglot.optimiser), [1] ScriptOutputField (class in piglot.solver.input_file_solver), [1] ScriptSolver (class in piglot.solver.script_solver), [1]

ScriptSolverCallable (class in piglot.solver.script_solver), [1] SimpleReduction (class in piglot.utils.reductions) SingleCaseSolver (class in piglot.solver.solver), [1] solve() (CurveSolver method) (InputFileSolver method) (LinksSolver method) (MultiCaseSolver method), [1] (ScriptSolver method) (ScriptSolverCallable static method), [1] (SingleCaseSolver method), [1] (Solver method), [1] Solver (class in piglot.solver.solver), [1] SPSA (class in piglot.optimisers.spsa), [1] SPSA_Adam (class in piglot.optimisers.spsa_adam), [1] SquareResponse (class in piglot.utils.response_transformer) Standardiser (class in piglot.optimisers.botorch.dataset), [1] stats_interp_to_common_grid() (in module piglot.utils.assorted), [1] StoppingCriteria (class in piglot.optimiser), [1] str_to_numeric() (in module piglot.optimisers), [1] success (CaseResult attribute) SumScalarisation (class in piglot.utils.scalarisations) SyntheticObjective (class in piglot.objectives.synthetic), [1]

T

test_reduction() (NegateReduction method) (Reduction method) (SimpleReduction method) time (OutputResult attribute) to() (BayesDataset method), [1] (PCA method), [1] (Standardiser method), [1] to_dict() (DualParameterSet method), [1] (ParameterSet method), [1] to_output() (DualParameterSet method), [1] transform() (AffineTransformResponse method) (ChainResponse method) (ClipResponse method) (MaximumResponse method) (MinimumResponse method) (NegateResponse method) (PCA method), [1] (PointwiseErrors method) (ResponseTransformer method) (SquareResponse method) (Standardiser method), [1]

transform_outcomes() (BayesDataset method), [1]

U

UniqueKeyLoader (class in piglot.utils.yaml_parser), [1] untransform() (PCA method), [1] (Standardiser method), [1] untransform_outcomes() (BayesDataset method), [1]

update() (DynamicPlotter method), [1] (DynamicResponsePlotter method) update_mo_data() (QueryOptimiser method) update_stats() (BayesDataset method), [1]

V

values (CaseResult attribute) (ObjectiveResult attribute)

VerbosityManager (class in piglot.utils.solver_utils), [1]

W

write() (CaseResult method), [1]

write_parameters() (in module piglot.solver.input_file_solver), [1]